github/hallamlab/TreeSAPP

We use CiteLang to clone this repository, and parse found dependency files to generate this credit table and badge. For each research software repository, we assign a credit split (0.5 or 50/50) to say that the research software gets 50% of the credit, and the remaining 50% is shared by the dependencies. The same holds true for the children of dependencies up until we reach a minimum level of credit in the tree, at which point we stop parsing.

Software Credit

Manager Name Credit
pypi numpy 0.095
pypi pyfastx 0.082
pypi joblib 0.065
pypi scipy 0.065
pypi seaborn 0.065
pypi matplotlib 0.065
pypi biopython 0.062
pypi ete3 0.062
pypi pygtrie 0.062
pypi six 0.062
pypi jinja2 0.03
pypi railroad-diagrams 0.03
pypi hypothesis 0.015
pypi pytest 0.014
pypi requests 0.013
pypi colorama 0.013
pypi pytest-xdist 0.01
pypi pytz 0.01
pypi python-dateutil 0.01
requirements.txt github/hallamlab/TreeSAPP 0.01
pypi slack-sdk 0.008
pypi ipywidgets 0.008
pypi wheel 0.008
pypi twine 0.008
pypi py-make 0.008
pypi importlib-resources 0.008
pypi packaging 0.006
pypi xmlschema 0.005
pypi pygments 0.005
pypi nose 0.005
pypi mock 0.005
pypi argcomplete 0.005
pypi atomicwrites 0.005
pypi importlib-metadata 0.005
pypi tomli 0.005
pypi py 0.005
pypi pluggy 0.005
pypi iniconfig 0.005
pypi attrs 0.005
pypi pandas 0.004
pypi pyamg 0.003
pypi mypy 0.003
pypi black 0.003
pypi flake8 0.003
pypi pytest-cov 0.003
pypi sphinxext-opengraph 0.003
pypi sphinx-prompt 0.003
pypi Pillow 0.003
pypi numpydoc 0.003
pypi sphinx-gallery 0.003
pypi sphinx 0.003
pypi scikit-image 0.003
pypi memory-profiler 0.003
pypi threadpoolctl 0.003
pypi samsum 0.001
pypi scikit-learn 0.001
pypi tqdm 0.001
pypi pyparsing 0.001

Note that credit values are rounded and expanded (so shared dependencies are represented as one record) and may not add to 1.0. Rounded values that hit zero are removed.

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